RAS Chemistry & Material ScienceХимическая физика Advances in Chemical Physics

  • ISSN (Print) 0207-401X
  • ISSN (Online) 3034-6126

Induced Optical Activity of Proflavine in Complex with DNA

PII
10.31857/S0207401X23090091-1
DOI
10.31857/S0207401X23090091
Publication type
Status
Published
Authors
Volume/ Edition
Volume 42 / Issue number 9
Pages
74-82
Abstract
Proflavine (PF)—2,6-diaminoacridine—is a mutagen and, as one of the dyes of the acridine series, it is able to form complexes with DNA, which leads both to the appearance of optical activity in the long-wave absorption band of the dye and to a change in optical activity in the UV region of the spectrum, where the absorption of nitrogenous bases of DNA is observed. An experimental study of optical activity in the form of circular dichroism (CD) spectra shows that in the visible region of the spectrum, optical activity is caused by the exciton chromophore-chromophore interaction of dye molecules that have formed a complex with an asymmetric helical DNA molecule. The appearance of an additional CD in the UV region is related to the exciton interaction of short-wavelength optical transitions of dye molecules with similar frequencies of the UV transitions of nucleic bases. The decomposition of the CD spectra into components makes it possible to isolate the contribution from the interaction of long-wavelength dye transitions with the short-wavelength (UV) transitions of the neighboring chromophores. In particular, a contribution was found from the interaction of the magnetic transition moment of chromophores in higher vibrational states with the dipole transition moments of the neighboring chromophores. This previously undescribed effect is related to the violation of the symmetry plane of the aromatic system of the dye in higher vibrational states; it is absent in the region of the zero vibrational band. The constructed decomposition procedure makes it possible to separate from the total CD spectra the contributions of the optical interactions previously described theoretically, which potentially allows us to estimate the geometric parameters of the complex.
Keywords
круговой дихроизм индуцированная оптическая активность мутагены профлавин.
Date of publication
01.09.2023
Year of publication
2023
Number of purchasers
0
Views
72

References

  1. 1. Crick F.H., Barnett L., Brenner S. et al. // Nature. 1961. V. 192. P. 1227; https://doi.org/10.1038/1921227a0
  2. 2. Стовбун С.В., Занин А.М., Скоблин А.А. и др. // Хим. физика. 2019. Т. 38. № 5. С. 54; https://doi.org/10.1134/S0207401X19040113
  3. 3. Полетаев А.И. // Итоги науки и техники. Сер. “Молекулярная биология”. Т. 8. Ч. II. М.: ВИНИТИ, 1976. С. 180.
  4. 4. Пронкин П.Г, Татиколов А.С. // Хим. физика. 2021. Т. 40. № 2. С. 3; https://doi.org/10.31857/S0207401X2102014X
  5. 5. Терешкин Э.В., Терешкина К.Б., Коваленко В.В. и др. // Хим. физика. 2019. Т. 8. № 10. С. 48; https://doi.org/10.1134/S0207401X19100091
  6. 6. Крупянский Ю.Ф. // Хим. физика. 2021. Т. 40. № 3. С. 60; https://doi.org/10.31857/S0207401X21030079
  7. 7. Lerman L.S. // J. Mol. Biol. 1961. V. 3. P. 18.
  8. 8. Lerman L.S. // Proc. Nat. Acad. Sci. USA. 1963. V. 49. P. 94.
  9. 9. Гурский Г.В. // Биофизика. 1966. V. 11. P. 737.
  10. 10. Ivanov V.I., Minchenkova L.E., Scholkina A.K. et al. // Biopolymers. 1973. V. 12. P. 89; https://doi.org/10.1002/bip.1973.360120109
  11. 11. Rosenfeld L. // Z. Physik. 1928. V. 52. P. 161.
  12. 12. Снатске Г. // Дисперсия оптического вращения и круговой дихроизм в органической химии. М.: Мир, 1970. С. 45.
  13. 13. Kirkwood J.G. // J. Chem. Phys. 1937. V. 5. P. 479; https://doi.org/10.1063/1.1750060
  14. 14. Tinoco I. // Adv. Chem. Phys. 1962. V. 4. P. 113.
  15. 15. Moffitt W. // J. Chem. Phys. 1956. V. 25. P. 467.
  16. 16. Woody R.W., Tinoco I. // Ibid. 1967. V. 46. P. 4927; https://doi.org/10.1063/1.1840658
  17. 17. Tinoco I. // Rad. Res. 1963. V. 20. P. 133.
  18. 18. Johnson W.C., Tinoco I. // Biopolymers. 1969. V. 7. P. 727; https://doi.org/10.1002/bip.1969.360080603
  19. 19. Макаров В.Л., Полетаев А.И., Волькенштейн М.В. // Молекуляр. биология. 1977. Т. 11. С. 238.
  20. 20. Kamiya M. // Biochim. Biophys. Acta. 1979. V. 562. P. 70; https://doi.org/10.1016/0005-2787 (79)90127-8
  21. 21. Kypr J., Kejnovska I., Renciuk D. et al. // Nucleic Acids Res. 2009. V. 37. P. 1713; https://doi.org/10.1093/nar/gkp026
  22. 22. Schreibe R., Luong N., Fan Z. et al. // Nat. Commun. 2013. V. 4. P. 2948; https://doi.org/10.1038/ncomms3948
  23. 23. Wang X., Tang Z. // Small. 2017. V. 13. P. 1601115; https://doi.org/10.1002/smll.201601115
  24. 24. Shin S.W., Yuk J.S., Chun S.H. et al. // Nano Converg. 2020. V. 7. P. 2; https://doi.org/10.1186/s40580-019-0211-4
  25. 25. Zimmer Ch., Wähnert U. // Prog. Biophys. Molec. Biol. 1986. V. 47. P. 31; https://doi.org/10.1016/0079-6107 (86)90005-2
  26. 26. Макаров В.Л., Полетаев А.И., Свешников П.Г. и др. // Молекуляр. биология. 1979. Т. 13. С. 450.
  27. 27. Moore D.S., Wagner N.T. // Biopolymers. 1973. V. 12. № 1. P. 201; https://doi.org/10.1002/BIP.1974.360130512
  28. 28. Langridge R., Marvin D.F., Seeds W.E. et al. // J. Mol. Biol. 1960. V. 2. P. 38; https://doi.org/10.1016/S0022-2836 (60)80005-8
  29. 29. Fuller W., Wilkins M.H.F., Wilson Y.R. et al. // Ibid. 1965. V. 12. P. 60; https://doi.org/10.1016/s0022-2836 (65)80282-0
  30. 30. Теренин А.Н. Фотоника молекул красителей и родственных органических соединений Л.: Наука, 1967.
  31. 31. Франк-Каменецкий М.Д., Лукашин А.В. // Оптика и спектроскопия. 1971. Т. 30. С. 481.
  32. 32. Иванов А.А., Пурецкий А.А., Лукашин А.В. и др. // Письма в ЖЭТФ. 1971. Т. 14. С. 419.
  33. 33. Иванов А.А., Пурецкий А.А., Лукашин А.В. и др. // Оптика и спектроскопия. 1972. Т. 32. С. 481.
  34. 34. Пермогоров В.И. // Молекуляр. биология. 1973. Т. 7. С. 20.
  35. 35. Dalgleish D.G., Fujita H., Peacocke A.R. // Biopolimers. 1969. V. 8. P. 623; https://doi.org/10.1002/BIP.1969.360080506
  36. 36. Преч Э., Бюльманн Ф., Аффольтер К. Определение строения органических соединений. Таблицы спектральных данных. М.: Мир, 2006.
QR
Translate

Индексирование

Scopus

Scopus

Scopus

Crossref

Scopus

Higher Attestation Commission

At the Ministry of Education and Science of the Russian Federation

Scopus

Scientific Electronic Library