- PII
- 10.31857/S0207401X24120086-1
- DOI
- 10.31857/S0207401X24120086
- Publication type
- Article
- Status
- Published
- Authors
- Volume/ Edition
- Volume 43 / Issue number 12
- Pages
- 84-94
- Abstract
- In this work, using coarse-grained molecular modeling methods, the interactions of DNA-binding protein from starved cells (Dps) of the bacterium Escherichia coli with DNA sections of various lengths and composition were investigated. The binding features in two-dimensional crystals of the Dps protein were studied. Using free energy search methods – thermodynamic integration and linear interaction energy – the most favorable conditions for the binding of DNA and Dps were determined.
- Keywords
- молекулярная динамика термодинамическое интегрирование линейная энергия взаимодействия взаимодействия Dps–ДНК полноатомные модели крупнозернистые модели бактерия Escherichia coli
- Date of publication
- 14.09.2025
- Year of publication
- 2025
- Number of purchasers
- 0
- Views
- 2
References
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